CDS

Accession Number TCMCG042C62801
gbkey CDS
Protein Id XP_016494937.1
Location join(33950..34180,34268..34561,34740..34805,35493..35588,37475..37891,38075..38186,39516..39601,43188..43250)
Gene LOC107814119
GeneID 107814119
Organism Nicotiana tabacum

Protein

Length 454aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016639451.1
Definition PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD-box ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K18655        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGACAGCTCAAATACTTCCAGTAGCACCGCCGCAACTACGACGGCAAACCCGCCGGAAATCAGAAGTTGGGCAGACGAAGCCGACGAGATCGATCAAGCCGAGAAGTCCTCTGCTGCTAATGAAAGCGATAGCGCCGAGCCCAAAATCGGATCTCTACAAATCGACGAGTCCAAAAGAGTCAACAATTCCACTCTCGATGATCCAGAAGATTCCAGAATAGAAGCCGTTACATCTGGCGACACGTTGTACAAATCAGCTAAGAGATTTGAGGATTTGAACTTATCTCCGGAGTTGTTGAAGGGATTATATGTAGAGATGAAGTTTGAGCGACCTAGTAAAATTCAAGAGATTAGTTTGCCTATGATTCTTACGCCGCCCTACAAGAATCTAATTGCTCAGGCTCATAATGGTTCTGGTAAAACTACTTGCTTTGTGCTTGGGATGTTGAGTCGGGTTGACCCTAAGCTTGCTGCCCCTCAAGCTCTCTGTATCTGCCCAACCAGAGAATTAGCAATTCAGAATATGGAGGTTCTGTTGAAGATGGGGAAGTTCACTGGTATAACATCAGAGTTAGCTATNCGTCATTTGCTTATTAATGTTCTTCTTTGTGCACAGACCGGTTTTCAGGATGATTCCATAAGAATAATGAAGGCAATAGTCAAAGCCAGTGCTGACAGCCAGGTGCTTCTGTTTTCTGCAACTTTTGGGGAAAATGTAAAAGCCTTTGTGACAAAAATTGTTAGAGATCTTTTCGTGAAAGATTACAACCAGATGTTTGTGAAGAAAGAAGAACTTTCGCTGGATTCAGTGAAGCAGTATAAAGTGCAGTGTCCGGATGAACTTTCAAAAGTCATGGTGATTAAAGACAAAATACTTGAACTAGGACAGAAGGTGGGGCAGACAATTATATTTGTTCGTACAAAAAATGGTGCGAGTATGTTGCATAAATCATTGGTTGACTATGGATATGAAGTGACAACAATTCAAGGTGCTTTGAAGCAAGAAGATAGAGACAAAATAATCAAGGAGTTCAAAGAAGGATTGACACAAGTTCTTATATCAACTGATCTTCTTGCTCGTGGATTTGACCAATCTCAGGTTAATTTGGTGGTTAATTATGATCTCCCGGTGAGACATGAGAGTCCATCAGAGCCAGATCATGAGGTATACTTGCATCGGATTGGTAGAGCTGGGCGTTTTGGCCGCAAAGGTGCCATATTCAACTTGCTCTGCAATGACCGGGACGACATGCTAATGTCAAAGATTGAGAATCATTTCAACAGTCAAGTGACGGAGATCGCCTCATGGAAGAGCGATGAAGATTTTGAGAATGCTCTGAAGAAAGCTGGCTTGCTCTAA
Protein:  
MADSSNTSSSTAATTTANPPEIRSWADEADEIDQAEKSSAANESDSAEPKIGSLQIDESKRVNNSTLDDPEDSRIEAVTSGDTLYKSAKRFEDLNLSPELLKGLYVEMKFERPSKIQEISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELAIQNMEVLLKMGKFTGITSELAXRHLLINVLLCAQTGFQDDSIRIMKAIVKASADSQVLLFSATFGENVKAFVTKIVRDLFVKDYNQMFVKKEELSLDSVKQYKVQCPDELSKVMVIKDKILELGQKVGQTIIFVRTKNGASMLHKSLVDYGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLLARGFDQSQVNLVVNYDLPVRHESPSEPDHEVYLHRIGRAGRFGRKGAIFNLLCNDRDDMLMSKIENHFNSQVTEIASWKSDEDFENALKKAGLL